[English] 日本語
EMN search
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 370 items for (author: lopez & e)

EMDB-18342:
E. coli DNA gyrase bound to a DNA crossover
Method: single particle / : Vayssieres M, Lamour V, Marechal N

EMDB-18565:
E. coli DNA gyrase bound to a DNA crossover
Method: single particle / : Vayssieres M, Lamour V, Marechal N

EMDB-18566:
Focused map of GyrA-CTD and T-segment DNA from the DNA crossover-gyrase complex
Method: single particle / : Vayssieres M, Lamour V, Marechal N

EMDB-18567:
Focused map of GyrA-CTD from DNA crossover-gyrase complex
Method: single particle / : Vayssieres M, Lamour V, Marechal N

EMDB-18603:
E. coli DNA gyrase bound to a linear part of a DNA minicircle
Method: single particle / : Vayssieres M, Lamour V, Marechal N

EMDB-18605:
Asymetric subunit of E. coli DNA gyrase bound to a linear part of a DNA minicircle
Method: single particle / : Vayssieres M, Lamour V, Marechal N

PDB-8qdx:
E. coli DNA gyrase bound to a DNA crossover
Method: single particle / : Vayssieres M, Lamour V

PDB-8qqs:
E. coli DNA gyrase bound to a linear part of a DNA minicircle
Method: single particle / : Vayssieres M, Lamour V

PDB-8qqu:
Asymetric subunit of E. coli DNA gyrase bound to a linear part of a DNA minicircle
Method: single particle / : Vayssieres M, Lamour V

EMDB-15698:
Cryo-EM structure of Cas12k-sgRNA binary complex (type V-K CRISPR-associated transposon)
Method: single particle / : Tenjo-Castano F, Sofos N, Stella S, Molina R, Pape T, Lopez-Mendez B, Stutzke LS, Temperini P, Montoya G

PDB-8axb:
Cryo-EM structure of Cas12k-sgRNA binary complex (type V-K CRISPR-associated transposon)
Method: single particle / : Tenjo-Castano F, Sofos N, Stella S, Molina R, Pape T, Lopez-Mendez B, Stutzke LS, Temperini P, Montoya G

EMDB-29941:
HPV16 E6-E6AP-p53 complex
Method: single particle / : Bratkowski MA, Wang JCK, Hao Q, Nile AH

EMDB-15689:
Mouse serotonin 5-HT3A receptor in complex with vortioxetine
Method: single particle / : Lopez-Sanchez U, Nury H

PDB-8aw2:
Mouse serotonin 5-HT3A receptor in complex with vortioxetine
Method: single particle / : Lopez-Sanchez U, Nury H

EMDB-15699:
Human serotonin 5-HT3A receptor (apo, resting conformation)
Method: single particle / : Lopez-Sanchez U, Nury H

PDB-8axd:
Human serotonin 5-HT3A receptor (apo, resting conformation)
Method: single particle / : Lopez-Sanchez U, Nury H

EMDB-17297:
Structure of a human 48S translation initiation complex with eIF4F and eIF4A
Method: single particle / : Brito Querido J, Sokabe M, Diaz-Lopez I, Gordiyenko Y, Fraser CS, Ramakrishnan V

PDB-8oz0:
Structure of a human 48S translation initiation complex with eIF4F and eIF4A
Method: single particle / : Brito Querido J, Sokabe M, Diaz-Lopez I, Gordiyenko Y, Fraser CS, Ramakrishnan V

PDB-8phe:
ACAD9-WT in complex with ECSIT-CTER
Method: single particle / : McGregor L, Acajjaoui S, Desfosses A, Saidi M, Bacia-Verloop M, Schwarz JJ, Juyoux P, Von Velsen J, Bowler MW, McCarthy A, Kandiah E, Gutsche I, Soler-Lopez M

PDB-8phf:
Cryo-EM structure of human ACAD9-S191A
Method: single particle / : McGregor L, Acajjaoui S, Desfosses A, Saidi M, Bacia-Verloop M, Schwarz JJ, Juyoux P, Von Velsen J, Bowler MW, McCarthy A, Kandiah E, Gutsche I, Soler-Lopez M

EMDB-40242:
BG505 MD39 SOSIP in complex with Rh.NJ85 wk12 gp120GH, N611/FP, and base epitope polyclonal antibodies
Method: single particle / : Lee WH, Ozorowski G, Torres JL, Ward AB

EMDB-40243:
BG505 MD39 SOSIP in complex with Rh.NJ86 wk12 V1V3, C3V5, N611/FP, and base epitope polyclonal antibodies
Method: single particle / : Lee WH, Ozorowski G, Torres JL, Ward AB

EMDB-40244:
BG505 MD39 SOSIP in complex with Rh.NJ76 wk12 C3V5, N611/FP, and base epitope polyclonal antibodies
Method: single particle / : Lee WH, Ozorowski G, Torres JL, Ward AB

EMDB-40252:
BG505 MD39 SOSIP in complex with Rh.NK04 wk12 gp120 glycan hole and base epitope polyclonal antibodies
Method: single particle / : Lee WS, Ozorowski G, Torres JL, Ward AB

EMDB-40254:
BG505 MD39 SOSIP in complex with Rh.NJ75 wk12 gp120 glycan hole and base epitope polyclonal antibodies
Method: single particle / : Lee WS, Ozorowski G, Torres JL, Ward AB

EMDB-40255:
BG505 MD39 SOSIP in complex with Rh.NJ87 wk12 C3V5 and base epitope polyclonal antibodies
Method: single particle / : Lee WS, Ozorowski G, Torres JL, Ward AB

EMDB-40256:
BG505 MD39 SOSIP in complex with Rh.NJ84 wk12 V1V3, gp120 glycan hole and base epitope polyclonal antibodies
Method: single particle / : Lee WS, Ozorowski G, Torres JL, Ward AB

EMDB-40257:
BG505 MD39 SOSIP in complex with Rh.NJ77 wk12 V1V3, C3V5, N611/FP and base epitope polyclonal
Method: single particle / : Lee WS, Ozorowski G, Torres JL, Ward AB

EMDB-29013:
96nm doublet microtubule repeat from wild type mouse sperm
Method: subtomogram averaging / : Hwang JY, Chai P, Nawaz S

EMDB-28606:
96nm doublet microtubule repeat from LRRC23-KO mouse sperm
Method: subtomogram averaging / : Hwang JY, Chai P, Nawaz S

EMDB-16555:
Mouse serotonin 5-HT3A receptor in complex with PZ-1922
Method: single particle / : Lopez-Sanchez U, Nury H

EMDB-16557:
Mouse serotonin 5-HT3A receptor in complex with PZ-1939
Method: single particle / : Lopez-Sanchez U, Nury H

PDB-8cc6:
Mouse serotonin 5-HT3A receptor in complex with PZ-1922
Method: single particle / : Lopez-Sanchez U, Nury H

PDB-8cc7:
Mouse serotonin 5-HT3A receptor in complex with PZ-1939
Method: single particle / : Lopez-Sanchez U, Nury H

EMDB-26786:
CPV Affinity Purified Polyclonal Fab A Site Fab
Method: single particle / : Hartmann SR, Hafenstein SL, Charnesky AJ

EMDB-26787:
CPV Affinity Purified Polyclonal Fab B Site Fab
Method: single particle / : Hartmann SR, Hafenstein SL, Charnesky AJ

EMDB-26788:
CPV Total-Fab Polyclonal A Site Fab
Method: single particle / : Hartmann SR, Hafenstein SL, Charnesky AJ

EMDB-26789:
CPV Total-Fab Polyclonal B Site Fab (1 of 2)
Method: single particle / : Hartmann SR, Hafenstein SL, Charnesky AJ

EMDB-26790:
CPV Total-Fab Polyclonal B Site Fab (2 of 2)
Method: single particle / : Hartmann SR, Hafenstein SL, Charnesky AJ

EMDB-17576:
SARS-CoV-2 S-protein:D614G mutant in 1-up conformation
Method: single particle / : Adhav A, Forcada-Nadal A, Marco-Marin C, Lopez-Redondo ML, Llacer JL

EMDB-17578:
SARS-CoV-2 S protein S:D614G mutant in 3-down with binding site of an entry inhibitor
Method: single particle / : Adhav A, Forcada-Nadal A, Marco-Marin C, Lopez-Redondo ML, Llacer JL

PDB-8p99:
SARS-CoV-2 S-protein:D614G mutant in 1-up conformation
Method: single particle / : Adhav A, Forcada-Nadal A, Marco-Marin C, Lopez-Redondo ML, Llacer JL

PDB-8p9y:
SARS-CoV-2 S protein S:D614G mutant in 3-down with binding site of an entry inhibitor
Method: single particle / : Adhav A, Forcada-Nadal A, Marco-Marin C, Lopez-Redondo ML, Llacer JL

EMDB-40789:
BAP1/ASXL1 bound to the H2AK119Ub Nucleosome
Method: single particle / : Thomas JF, Valencia-Sanchez MI, Armache KJ

EMDB-40790:
Map focused on acidic patch BAP1/ASXL1 bound to the H2AK119Ub Nucleosome
Method: single particle / : Thomas JF, Valencia-Sanchez MI

EMDB-40791:
Overall map of BAP1/ASXL1 bound to the H2AK119Ub Nucleosome
Method: single particle / : Thomas JF, Valencia-Sanchez MI

EMDB-33650:
SARS-CoV-2 spike glycoprotein trimer complexed with Fab fragment of anti-RBD antibody E7
Method: single particle / : Chia WN, Tan CW, Tan AWK, Young B, Starr TN, Lopez E, Fibriansah G, Barr J, Cheng S, Yeoh AYY, Yap WC, Lim BL, Ng TS, Sia WR, Zhu F, Chen S, Zhang J, Greaney AJ, Chen M, Au GG, Paradkar P, Peiris M, Chung AW, Bloom JD, Lye D, Lok SM, Wang LF

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242):Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more